Transcript: ENST00000504742.1 SLC4A9-005

Description

solute carrier family 4, sodium bicarbonate cotransporter, member 9 [Source:HGNC Symbol;Acc:11035]

Gene Synonyms

AE4, SBC5

Location

Chromosome 5: 139,751,034-139,754,514 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1497 variant alleles and maps to 263 oligo probes.

Gene

This transcript is a product of gene ENSG00000113073.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000230993.6	SLC4A9-201	3343	983aa	ENSP00000230993.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58973	Q96Q91	NM_001258428.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506757.2	SLC4A9-001	3277	959aa	ENSP00000424424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47278	Q96Q91	NM_031467.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507527.1	SLC4A9-002	3258	983aa	ENSP00000427661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58973	Q96Q91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432095.2	SLC4A9-004	3086	945aa	ENSP00000410056.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58975	Q96Q91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506545.1	SLC4A9-003	2838	896aa	ENSP00000422855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58974	Q96Q91	NM_001258427.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504742.1	SLC4A9-005	680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514849.1	SLC4A9-006	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 680 bps,

Version

ENST00000504742.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372826 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000504742.1 SLC4A9-005

Summary