Transcript: ENST00000507097.1 HSPA9-002

Description

heat shock 70kDa protein 9 (mortalin) [Source:HGNC Symbol;Acc:5244]

Gene Synonyms

CSA, GRP-75, GRP75, HSPA9B, MOT, MOT2, MTHSP75, PBP74, mot-2, mt-HSP70, mthsp75

Location

Chromosome 5: 137,893,031-137,911,090 reverse strand.

About this transcript

This transcript has 13 exons, is associated with 9226 variant alleles and maps to 440 oligo probes.

Gene

This transcript is a product of gene ENSG00000113013.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297185.3	HSPA9-001	3321	679aa	ENSP00000297185.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4208	D6RA73 D6RJI2 P38646	NM_004134.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504810.1	HSPA9-010	584	95aa	ENSP00000425598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA73 D6RJI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507886.1	HSPA9-011	551	62aa	ENSP00000423098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA73	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504902.1	HSPA9-008	887	100aa	ENSP00000421311.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523929.1	HSPA9-013	780	163aa	ENSP00000429475.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000507115.1	HSPA9-003	663	42aa	ENSP00000423759.1	Nonsense mediated decay		D6RCD7	-	-
ENST00000505110.1	HSPA9-004	518	38aa	ENSP00000420944.1	Nonsense mediated decay		D6RDH7	-	-
ENST00000512328.1	HSPA9-007	482	102aa	ENSP00000421892.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000501917.2	HSPA9-012	275	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507097.1	HSPA9-002	1796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524109.1	HSPA9-014	1175	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506477.1	HSPA9-005	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508003.1	HSPA9-006	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 0, Transcript length: 1,796 bps,

Version

ENST00000507097.1

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000373736 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000507097.1 HSPA9-002

Summary