Transcript: ENST00000356654.4 ATN1-002

Description

atrophin 1 [Source:HGNC Symbol;Acc:3033]

Gene Synonyms

B37, D12S755E, DRPLA, HRS, NOD

Location

About this transcript

This transcript has 10 exons, is annotated with 44 domains and features, is associated with 9749 variant alleles and maps to 769 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356654.4	ATN1-002	4351	1190aa	ENSP00000349076.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31734	P54259 Q86V38	NM_001007026.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396684.2	ATN1-001	4290	1190aa	ENSP00000379915.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31734	P54259 Q86V38	NM_001940.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537488.1	ATN1-005	899	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541029.1	ATN1-004	855	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 4,351 bps, Translation length: 1,190 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54259

CCDS

This transcript is a member of the Human CCDS set: CCDS31734

Version

ENST00000356654.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000401948 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.