Transcript: ENST00000341259.2 SH2B3-001

Description

SH2B adaptor protein 3 [Source:HGNC Symbol;Acc:29605]

Gene Synonyms

IDDM20, LNK

Location

About this transcript

This transcript has 8 exons, is annotated with 22 domains and features, is associated with 20485 variant alleles and maps to 465 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341259.2	SH2B3-001	5406	575aa	ENSP00000345492.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9153	Q9UQQ2	NM_005475.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538307.1	SH2B3-002	2062	373aa	ENSP00000440597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYM4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000550925.2	SH2B3-003	648	216aa	ENSP00000473529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 5,406 bps, Translation length: 575 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UQQ2

CCDS

This transcript is a member of the Human CCDS set: CCDS9153

Version

ENST00000341259.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000404779 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.