Transcript: ENST00000227880.3 SLC15A3-001

Description

solute carrier family 15 (oligopeptide transporter), member 3 [Source:HGNC Symbol;Acc:18068]

Gene Synonyms

OCTP, PHT2, PTR3, hPTR3

Location

Chromosome 11: 60,704,556-60,719,257 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features, is associated with 7173 variant alleles and maps to 381 oligo probes.

Gene

This transcript is a product of gene ENSG00000110446.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000227880.3	SLC15A3-001	2115	581aa	ENSP00000227880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7998	F5GZ36 F5H251 Q8IY34	NM_016582.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537307.1	SLC15A3-003	801	247aa	ENSP00000437908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000538739.1	SLC15A3-005	691	149aa	ENSP00000441559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ36	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536491.1	SLC15A3-009	676	209aa	ENSP00000439535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H251	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536784.1	SLC15A3-007	456	43aa	ENSP00000441694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YG40	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000541505.1	SLC15A3-002	1807	456aa	ENSP00000445773.1	Nonsense mediated decay		F5GZ36 F5H1C8	-	-
ENST00000543406.1	SLC15A3-006	4579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540272.1	SLC15A3-004	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544101.1	SLC15A3-008	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,115 bps, Translation length: 581 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IY34

CCDS

This transcript is a member of the Human CCDS set: CCDS7998

Version

ENST00000227880.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000396366 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000227880.3 SLC15A3-001

Summary