Transcript: ENST00000543530.1 ARHGEF17-006

Description

Rho guanine nucleotide exchange factor (GEF) 17 [Source:HGNC Symbol;Acc:21726]

Gene Synonyms

KIAA0337, P164RHOGEF, TEM4, p164-RhoGEF

Location

About this transcript

This transcript has 3 exons, is associated with 1387 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263674.3	ARHGEF17-001	7853	2063aa	ENSP00000263674.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8221	Q96PE2	NM_014786.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544519.1	ARHGEF17-002	579	193aa	ENSP00000441135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000536170.1	ARHGEF17-003	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543530.1	ARHGEF17-006	970	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536481.1	ARHGEF17-005	697	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000537198.1	ARHGEF17-004	351	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 970 bps,

Version

ENST00000543530.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397370 (version 1)