Transcript: ENST00000263674.3 ARHGEF17-001

Description

Rho guanine nucleotide exchange factor (GEF) 17 [Source:HGNC Symbol;Acc:21726]

Gene Synonyms

KIAA0337, P164RHOGEF, TEM4, p164-RhoGEF

Location

About this transcript

This transcript has 21 exons, is annotated with 31 domains and features, is associated with 28792 variant alleles and maps to 704 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263674.3	ARHGEF17-001	7853	2063aa	ENSP00000263674.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8221	Q96PE2	NM_014786.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544519.1	ARHGEF17-002	579	193aa	ENSP00000441135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000536170.1	ARHGEF17-003	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543530.1	ARHGEF17-006	970	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536481.1	ARHGEF17-005	697	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000537198.1	ARHGEF17-004	351	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 7,853 bps, Translation length: 2,063 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PE2

CCDS

This transcript is a member of the Human CCDS set: CCDS8221

Version

ENST00000263674.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000397365 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.