Transcript: ENST00000461701.1 ATG2A-003

Description

autophagy related 2A [Source:HGNC Symbol;Acc:29028]

Gene Synonyms

KIAA0404

Location

About this transcript

This transcript has 3 exons, is associated with 2394 variant alleles and maps to 290 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000421419.2	ATG2A-201	6376	1940aa	ENSP00000410522.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DV45 Q2TAZ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377264.3	ATG2A-001	6357	1938aa	ENSP00000366475.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31602	B4DV45 Q2TAZ0	NM_015104.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418259.1	ATG2A-004	5654	1742aa	ENSP00000413716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000461701.1	ATG2A-003	2031	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461955.1	ATG2A-006	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472525.1	ATG2A-005	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,031 bps,

Version

ENST00000461701.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000143226 (version 1)