Transcript: ENST00000451739.2 HTATIP2-002

Description

HIV-1 Tat interactive protein 2, 30kDa [Source:HGNC Symbol;Acc:16637]

Gene Synonyms

CC3, FLJ26963, SDR44U1, TIP30

Location

Chromosome 11: 20,385,343-20,405,329 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 8353 variant alleles and maps to 475 oligo probes.

Gene

This transcript is a product of gene ENSG00000109854.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000451739.2	HTATIP2-002	1748	242aa	ENSP00000394259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7852	Q9BUP3	NM_001098522.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419348.2	HTATIP2-001	1477	276aa	ENSP00000392985.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44553	Q9BUP3	NM_001098520.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531058.1	HTATIP2-009	1060	196aa	ENSP00000436729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI87	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443524.2	HTATIP2-003	967	242aa	ENSP00000387876.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7852	Q9BUP3	NM_001098521.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421577.2	HTATIP2-004	886	242aa	ENSP00000397752.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7852	Q9BUP3	NM_006410.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532081.1	HTATIP2-007	774	133aa	ENSP00000432107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53613	Q9BUP3	NM_001098523.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530266.1	HTATIP2-006	713	133aa	ENSP00000436548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53613	Q9BUP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532505.1	HTATIP2-005	595	133aa	ENSP00000432338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53613	Q9BUP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533914.1	HTATIP2-008	1562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,748 bps, Translation length: 242 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BUP3

CCDS

This transcript is a member of the Human CCDS set: CCDS7852

Version

ENST00000451739.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387445 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000451739.2 HTATIP2-002

Summary