Transcript: ENST00000513433.1 SNX25-006

Description

sorting nexin 25 [Source:HGNC Symbol;Acc:21883]

Gene Synonyms

SBBI31

Location

About this transcript

This transcript has 3 exons, is associated with 3631 variant alleles and maps to 144 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000504273.1	SNX25-001	3323	840aa	ENSP00000426255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34116	B3KTI8 Q9H3E2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264694.8	SNX25-004	3264	840aa	ENSP00000264694.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34116	B3KTI8 Q9H3E2	NM_031953.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504959.1	SNX25-003	1868	142aa	ENSP00000424826.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512853.1	SNX25-002	1937	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506896.1	SNX25-005	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513433.1	SNX25-006	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 748 bps,

Version

ENST00000513433.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000360761 (version 1)