Transcript: ENST00000512656.1 USP46-008

Description

ubiquitin specific peptidase 46 [Source:HGNC Symbol;Acc:20075]

Gene Synonyms

FLJ12552

Location

Chromosome 4: 53,494,228-53,522,693 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 12239 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSG00000109189.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000441222.3	USP46-001	7954	366aa	ENSP00000407818.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47053	P62068	NM_022832.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451218.2	USP46-003	4622	339aa	ENSP00000390102.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZK6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508499.1	USP46-005	1419	359aa	ENSP00000423244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47054	P62068	NM_001134223.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503060.1	USP46-004	2437	40aa	ENSP00000422018.1	Nonsense mediated decay		D6R9Z4	-	-
ENST00000514536.1	USP46-002	1589	40aa	ENSP00000426970.1	Nonsense mediated decay		D6R9Z4	-	-
ENST00000512656.1	USP46-008	467	56aa	ENSP00000425806.1	Nonsense mediated decay		D6RIX7	-	-
ENST00000504078.1	USP46-006	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506707.1	USP46-007	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502443.1	USP46-009	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 467 bps, Translation length: 56 residues

Version

ENST00000512656.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361523 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000512656.1 USP46-008

Summary