Transcript: ENST00000226382.2 PHOX2B-001

Description

paired-like homeobox 2b [Source:HGNC Symbol;Acc:9143]

Gene Synonyms

NBLST2, NBPhox, PMX2B, Phox2b

Location

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 3213 variant alleles and maps to 368 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000226382.2	PHOX2B-001	3030	314aa	ENSP00000226382.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3463	Q99453	NM_003924.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510424.1	PHOX2B-002	538	179aa	ENSP00000426733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,030 bps, Translation length: 314 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99453

CCDS

This transcript is a member of the Human CCDS set: CCDS3463

Version

ENST00000226382.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000216832 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.