Transcript: ENST00000225831.4 CCL2-001

Description

chemokine (C-C motif) ligand 2 [Source:HGNC Symbol;Acc:10618]

Gene Synonyms

GDCF-2, HC11, HSMCR30, MCAF, MCP-1, MCP1, MGC9434, SCYA2, SMC-CF

Location

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 892 variant alleles and maps to 294 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225831.4	CCL2-001	741	99aa	ENSP00000225831.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11277	P13500 Q6UZ82	NM_002982.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580907.1	CCL2-004	736	65aa	ENSP00000462156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRT7 Q6UZ82	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582017.1	CCL2-003	996	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 741 bps, Translation length: 99 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13500

CCDS

This transcript is a member of the Human CCDS set: CCDS11277

Version

ENST00000225831.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256384 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.