Transcript: ENST00000580986.1 CCDC47-005

Description

coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:24856]

Gene Synonyms

GK001, MSTP041

Location

Chromosome 17: 61,843,479-61,853,711 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 5462 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene ENSG00000108588.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225726.5	CCDC47-001	3466	483aa	ENSP00000225726.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11643	Q96A33	NM_020198.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403162.3	CCDC47-002	2195	483aa	ENSP00000384888.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11643	Q96A33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582252.1	CCDC47-003	1719	480aa	ENSP00000463577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96A33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580986.1	CCDC47-005	552	19aa	ENSP00000462202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582331.2	CCDC47-006	693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584112.1	CCDC47-007	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 552 bps, Translation length: 19 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000580986.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444366 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000580986.1 CCDC47-005

Summary