Transcript: ENST00000588479.1 GALK1-001

Description

galactokinase 1 [Source:HGNC Symbol;Acc:4118]

Gene Synonyms

GALK, GK1, HEL-S-19

Location

Chromosome 17: 73,754,025-73,761,792 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 24 domains and features, is associated with 4109 variant alleles and maps to 358 oligo probes.

Gene

This transcript is a product of gene ENSG00000108479.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000588479.1	GALK1-001	1866	392aa	ENSP00000465930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11728	C8CHJ6 P51570 Q71UH7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000225614.2	GALK1-002	1445	392aa	ENSP00000225614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11728	C8CHJ6 P51570 Q71UH7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437911.1	GALK1-201	1379	422aa	ENSP00000406305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1G6 C8CHJ6 Q71UH7	NM_000154.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592997.1	GALK1-007	717	184aa	ENSP00000464765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EII7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586244.1	GALK1-003	1180	120aa	ENSP00000468288.1	Nonsense mediated decay		K7ERJ9	-	-
ENST00000587707.1	GALK1-006	667	91aa	ENSP00000468341.1	Nonsense mediated decay		K7ERN9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592494.1	GALK1-004	1121	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589030.1	GALK1-005	866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586733.1	GALK1-008	465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589643.1	GALK1-009	313	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,866 bps, Translation length: 392 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51570

CCDS

This transcript is a member of the Human CCDS set: CCDS11728

Version

ENST00000588479.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000448430 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000588479.1 GALK1-001

Summary