Transcript: ENST00000225614.2 GALK1-002

Description

galactokinase 1 [Source:HGNC Symbol;Acc:4118]

Gene Synonyms

GALK, GK1, HEL-S-19

Location

Chromosome 17: 73,747,675-73,761,317 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 24 domains and features, is associated with 7673 variant alleles and maps to 393 oligo probes.

Gene

This transcript is a product of gene ENSG00000108479.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000588479.1	GALK1-001	1866	392aa	ENSP00000465930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11728	C8CHJ6 P51570 Q71UH7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000225614.2	GALK1-002	1445	392aa	ENSP00000225614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11728	C8CHJ6 P51570 Q71UH7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437911.1	GALK1-201	1379	422aa	ENSP00000406305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1G6 C8CHJ6 Q71UH7	NM_000154.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592997.1	GALK1-007	717	184aa	ENSP00000464765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EII7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586244.1	GALK1-003	1180	120aa	ENSP00000468288.1	Nonsense mediated decay		K7ERJ9	-	-
ENST00000587707.1	GALK1-006	667	91aa	ENSP00000468341.1	Nonsense mediated decay		K7ERN9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592494.1	GALK1-004	1121	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589030.1	GALK1-005	866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586733.1	GALK1-008	465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589643.1	GALK1-009	313	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,445 bps, Translation length: 392 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51570

CCDS

This transcript is a member of the Human CCDS set: CCDS11728

Version

ENST00000225614.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000448427 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000225614.2 GALK1-002

Summary