Transcript: ENST00000264645.7 CASC3-001

Description

cancer susceptibility candidate 3 [Source:HGNC Symbol;Acc:17040]

Gene Synonyms

BTZ, MLN51, hsa-mir-6866

Location

Chromosome 17: 38,296,576-38,328,436 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 13 domains and features, is associated with 15279 variant alleles and maps to 578 oligo probes.

Gene

This transcript is a product of gene ENSG00000108349.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264645.7	CASC3-001	4116	703aa	ENSP00000264645.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11362	O15234	NM_007359.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584997.1	CASC3-007	543	66aa	ENSP00000467654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQ38	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474190.1	CASC3-002	908	223aa	ENSP00000462713.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000577605.1	CASC3-008	714	129aa	ENSP00000464626.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000394114.2	CASC3-005	2792	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000418132.3	CASC3-004	1986	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581849.1	CASC3-009	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583649.1	CASC3-006	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583902.1	CASC3-010	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000579238.1	CASC3-011	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 4,116 bps, Translation length: 703 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15234

CCDS

This transcript is a member of the Human CCDS set: CCDS11362

Version

ENST00000264645.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257127 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000264645.7 CASC3-001

Summary