Transcript: ENST00000361804.4 SMC3-001

Description

structural maintenance of chromosomes 3 [Source:HGNC Symbol;Acc:2468]

Gene Synonyms

BAM, BMH, CDLS3, CSPG6, HCAP, SMC3L1, bamacan

Location

About this transcript

This transcript has 29 exons, is annotated with 28 domains and features, is associated with 17893 variant alleles and maps to 908 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361804.4	SMC3-001	4114	1217aa	ENSP00000354720.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31285	Q9UQE7	NM_005445.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462899.1	SMC3-002	777	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 4,114 bps, Translation length: 1,217 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UQE7

CCDS

This transcript is a member of the Human CCDS set: CCDS31285

Version

ENST00000361804.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000050337 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.