Transcript: ENST00000420222.1 SH3PXD2A-003

Description

SH3 and PX domains 2A [Source:HGNC Symbol;Acc:23664]

Gene Synonyms

FISH, KIAA0418, SH3MD1, TKS5

Location

Chromosome 10: 105,361,503-105,561,055 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 36 domains and features, is associated with 83273 variant alleles and maps to 316 oligo probes.

Gene

This transcript is a product of gene ENSG00000107957.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369774.4	SH3PXD2A-001	11468	1133aa	ENSP00000358789.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ35 Q5TCZ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355946.2	SH3PXD2A-201	11245	1105aa	ENSP00000348215.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31278	Q5TCZ1	NM_014631.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420222.1	SH3PXD2A-003	3251	1060aa	ENSP00000395781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000540321.1	SH3PXD2A-204	3117	1000aa	ENSP00000443663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z9C6 F5GZ35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538130.1	SH3PXD2A-203	3039	968aa	ENSP00000441514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427662.2	SH3PXD2A-202	1393	369aa	ENSP00000392664.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCK5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315994.6	SH3PXD2A-002	5504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,251 bps, Translation length: 1,060 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000420222.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050180 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000420222.1 SH3PXD2A-003

Summary