Transcript: ENST00000527407.1 ATRNL1-005

Description

attractin-like 1 [Source:HGNC Symbol;Acc:29063]

Gene Synonyms

ALP, FLJ45344, KIAA0534, bA338L11.1, bA454H24.1

Location

Chromosome 10: 116,853,222-116,931,085 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 33549 variant alleles and maps to 261 oligo probes.

Gene

This transcript is a product of gene ENSG00000107518.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355044.3	ATRNL1-001	8479	1379aa	ENSP00000347152.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7592	Q5VV63	NM_207303.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423111.2	ATRNL1-202	1646	430aa	ENSP00000409624.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DH41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527407.1	ATRNL1-005	1583	398aa	ENSP00000473412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMZ1	NM_001276282.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000303745.7	ATRNL1-201	1330	172aa	ENSP00000307660.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MD97	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526946.1	ATRNL1-009	932	252aa	ENSP00000431423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PL90	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526373.1	ATRNL1-010	648	216aa	ENSP00000434118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000529665.1	ATRNL1-002	1816	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485327.2	ATRNL1-003	1699	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000424738.1	ATRNL1-004	768	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534530.1	ATRNL1-011	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000449616.2	ATRNL1-007	529	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524503.1	ATRNL1-008	311	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,583 bps, Translation length: 398 residues

Version

ENST00000527407.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000384497 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000527407.1 ATRNL1-005

Summary