Transcript: ENST00000490516.1 EXOSC3-004

Description

exosome component 3 [Source:HGNC Symbol;Acc:17944]

Gene Synonyms

CGI-102, PCH1B, RP11-3J10.8, RRP40, Rrp40p, bA3J10.7, hRrp-40, hRrp40p, p10

Location

Chromosome 9: 37,780,585-37,784,710 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1988 variant alleles and maps to 341 oligo probes.

Gene

This transcript is a product of gene ENSG00000107371.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327304.5	EXOSC3-001	1806	275aa	ENSP00000323046.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35016	Q9NQT5	NM_016042.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396521.3	EXOSC3-002	768	164aa	ENSP00000379775.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43805	Q9NQT5 Q9NYS3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465229.1	EXOSC3-005	1625	164aa	ENSP00000418422.1	Nonsense mediated decay	CCDS43805	Q9NQT5 Q9NYS3	-	-
ENST00000490516.1	EXOSC3-004	773	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489414.1	EXOSC3-009	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482614.1	EXOSC3-008	462	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465860.1	EXOSC3-007	509	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496910.1	EXOSC3-006	217	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 773 bps,

Version

ENST00000490516.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052481 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000490516.1 EXOSC3-004

Summary