Transcript: ENST00000377653.2 CNTNAP3-002

Description

contactin associated protein-like 3 [Source:HGNC Symbol;Acc:13834]

Gene Synonyms

CASPR3, CNTNAP3A, FLJ14195, KIAA1714, RP11-138L21.1, RP11-290L7.1

Location

Chromosome 9: 39,172,783-39,267,003 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 9892 variant alleles and maps to 519 oligo probes.

Gene

This transcript is a product of gene ENSG00000106714.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297668.6	CNTNAP3-001	5064	1288aa	ENSP00000297668.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6616	Q9BZ76	NM_033655.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358144.2	CNTNAP3-003	4885	1039aa	ENSP00000350863.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377656.2	CNTNAP3-202	3921	1207aa	ENSP00000366884.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NC89 B1AM99	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377659.1	CNTNAP3-006	2649	745aa	ENSP00000366887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AM99	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000323947.7	CNTNAP3-201	2166	652aa	ENSP00000320728.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E2QRH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443583.2	CNTNAP3-009	2411	604aa	ENSP00000432863.1	Nonsense mediated decay		F2Z2X6	-	-
ENST00000377653.2	CNTNAP3-002	2741	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483502.2	CNTNAP3-011	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493965.1	CNTNAP3-004	765	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000448573.2	CNTNAP3-007	652	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495573.2	CNTNAP3-005	475	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469061.1	CNTNAP3-010	417	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477002.1	CNTNAP3-008	291	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 2,741 bps,

Version

ENST00000377653.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052512 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000377653.2 CNTNAP3-002

Summary