Transcript: ENST00000429911.1 C1GALT1-006

Description

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 [Source:HGNC Symbol;Acc:24337]

Gene Synonyms

C1GALT, T-synthase

Location

Chromosome 7: 7,196,565-7,278,059 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 40784 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSG00000106392.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000436587.2	C1GALT1-201	6208	363aa	ENSP00000389176.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5355	C9JDX1 C9K0C8 Q9NS00	NM_020156.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000223122.3	C1GALT1-001	6078	363aa	ENSP00000223122.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5355	C9JDX1 C9K0C8 Q9NS00	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402468.3	C1GALT1-003	930	309aa	ENSP00000384550.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDX1 C9K0C8 Q9NS00	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429911.1	C1GALT1-006	802	131aa	ENSP00000407666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDX1 C9K0C8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419721.1	C1GALT1-004	591	100aa	ENSP00000415400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDX1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467716.1	C1GALT1-005	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476068.1	C1GALT1-002	1186	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 802 bps, Translation length: 131 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000429911.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000326718 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000429911.1 C1GALT1-006

Summary