Transcript: ENST00000478124.1 GARS-002

Description

glycyl-tRNA synthetase [Source:HGNC Symbol;Acc:4162]

Gene Synonyms

CMT2D, DSMAV, GlyRS, HMN5, SMAD1

Location

Chromosome 7: 30,634,500-30,662,304 forward strand.

About this transcript

This transcript has 12 exons, is associated with 11661 variant alleles and maps to 303 oligo probes.

Gene

This transcript is a product of gene ENSG00000106105.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389266.3	GARS-001	2634	739aa	ENSP00000373918.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43564	P41250 Q75MN1	NM_002047.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454308.1	GARS-003	814	79aa	ENSP00000392677.1	Nonsense mediated decay		F8WCK4	-	-
ENST00000444666.1	GARS-006	619	77aa	ENSP00000415447.1	Nonsense mediated decay		H7C443	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478124.1	GARS-002	1877	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496643.1	GARS-009	772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485784.1	GARS-008	761	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484093.1	GARS-005	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470392.1	GARS-004	469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465748.1	GARS-007	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 1,877 bps,

Version

ENST00000478124.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327736 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000478124.1 GARS-002

Summary