Human (GRCh37.p13)
Description

nucleotide-binding oligomerization domain containing 1 [Source:HGNC Symbol;Acc:16390]

Gene Synonyms

CARD4, CLR7.1, NLRC1

Location
About this transcript

This transcript has 15 exons, is annotated with 15 domains and features, is associated with 22547 variant alleles and maps to 633 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000222823.4NOD1-0014499953aaENSP00000222823.4
 
Protein coding
CCDS5427C9J8X8 Q7Z2K1 Q9Y239
NM_006092.2GENCODE basic
ENST00000423334.2NOD1-2011587249aaENSP00000409416.2
 
Protein coding
B4DTU3 C9J8X8 Q7Z2K1
-GENCODE basic
ENST00000411552.1NOD1-00479459aaENSP00000396046.1
 
Protein coding
C9J8X8 Q7Z2K1 -CDS 3' incomplete
ENST00000419799.1NOD1-00575759aaENSP00000395551.1
 
Protein coding
C9J8X8 Q7Z2K1 -CDS 3' incomplete
ENST00000413433.1NOD1-00663759aaENSP00000399505.1
 
Protein coding
C9J8X8 Q7Z2K1 -CDS 3' incomplete
ENST00000419601.1NOD1-00757845aaENSP00000410917.1
 
Protein coding
C9J8X8 -CDS 3' incomplete
ENST00000434755.1NOD1-0024610779aaENSP00000416946.1
 
Nonsense mediated decay
C9J8X8 G3XAL1 Q7Z2K1
--
ENST00000489614.1NOD1-0033098No protein-
 
Retained intron
---
ENST00000467706.1NOD1-008905No protein-
 
Retained intron
---
Statistics

Exons: 15, Coding exons: 5, Transcript length: 4,610 bps, Translation length: 779 residues

Version

ENST00000434755.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000328033 (version 1)