Transcript: ENST00000443817.1 CPED1-004

Description

cadherin-like and PC-esterase domain containing 1 [Source:HGNC Symbol;Acc:26159]

Gene Synonyms

C7orf58, FLJ21986

Location

Chromosome 7: 120,716,632-120,776,108 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 1 domain and feature, is associated with 26004 variant alleles and maps to 229 oligo probes.

Gene

This transcript is a product of gene ENSG00000106034.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310396.5	CPED1-001	5340	1026aa	ENSP00000309772.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34739	A4D0V7 E7ENG7 E9PCC8 Q75MM9	NM_024913.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450913.2	CPED1-007	2501	783aa	ENSP00000406122.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47690	A4D0V7 E7ENG7 E9PCC8 G5E9U2 Q75MM9	NM_001105533.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428526.1	CPED1-003	2219	549aa	ENSP00000398082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENG7 Q75MM9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000423795.1	CPED1-005	2189	563aa	ENSP00000415573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PCC8 G5E9U2 Q75MM9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443817.1	CPED1-004	1118	334aa	ENSP00000391952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PCC8 Q75MM9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000340646.5	CPED1-201	609	202aa	ENSP00000345235.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5MJQ4 Q86SV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520801.1	CPED1-008	553	60aa	ENSP00000428504.1	Nonsense mediated decay		H0YB19	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495036.1	CPED1-002	2198	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466055.1	CPED1-006	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521774.1	CPED1-009	264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,118 bps, Translation length: 334 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000443817.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346962 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000443817.1 CPED1-004

Summary