Transcript: ENST00000393467.1 CAV1-003

Description

caveolin 1, caveolae protein, 22kDa [Source:HGNC Symbol;Acc:1527]

Gene Synonyms

BSCL3, CAV, CGL3, MSTP085, PPH3, VIP21

Location

Chromosome 7: 116,166,347-116,201,230 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 15584 variant alleles and maps to 405 oligo probes.

Gene

This transcript is a product of gene ENSG00000105974.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341049.2	CAV1-001	2704	178aa	ENSP00000339191.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5767	C9JKI3 Q03135 Q2TNI1	NM_001753.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393467.1	CAV1-003	2628	147aa	ENSP00000377110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55156	C9JKI3 Q03135	NM_001172896.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405348.1	CAV1-008	2443	147aa	ENSP00000384348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55156	C9JKI3 Q03135	NM_001172897.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393468.1	CAV1-004	845	147aa	ENSP00000377111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55156	C9JKI3 Q03135	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393470.1	CAV1-006	598	167aa	ENSP00000377113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JKI3 E9PCT5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456473.1	CAV1-007	557	138aa	ENSP00000389033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JKI3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000451122.1	CAV1-002	1653	86aa	ENSP00000409541.1	Nonsense mediated decay		F8WDM7	-	-
ENST00000489856.1	CAV1-005	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,628 bps, Translation length: 147 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q03135

CCDS

This transcript is a member of the Human CCDS set: CCDS55156

Version

ENST00000393467.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000141424 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000393467.1 CAV1-003

Summary