Transcript: ENST00000439616.2 OGDH-005

Description

oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Source:HGNC Symbol;Acc:8124]

Gene Synonyms

AKGDH, E1k, OGDC

Location

Chromosome 7: 44,646,171-44,747,829 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 12 domains and features, is associated with 45629 variant alleles and maps to 554 oligo probes.

Gene

This transcript is a product of gene ENSG00000105953.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000222673.5	OGDH-001	4181	1023aa	ENSP00000222673.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34627	C9J4G7 Q02218	NM_002541.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449767.1	OGDH-002	3479	1019aa	ENSP00000392878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55107	Q02218	NM_001165036.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447398.1	OGDH-003	3474	1034aa	ENSP00000388183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDF2 F5H801	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444676.1	OGDH-006	3309	1038aa	ENSP00000414662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PCR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543843.1	OGDH-201	3266	974aa	ENSP00000443821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H801	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439616.2	OGDH-005	2962	873aa	ENSP00000398576.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PFG7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443864.2	OGDH-007	1744	427aa	ENSP00000388084.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47580	C9J4G7 Q02218	NM_001003941.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419661.1	OGDH-008	789	211aa	ENSP00000411830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4G7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000459672.1	OGDH-009	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497326.1	OGDH-010	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,962 bps, Translation length: 873 residues

Version

ENST00000439616.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000339395 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000439616.2 OGDH-005

Summary