Human (GRCh37.p13)
Description

SMG9 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:25763]

Gene Synonyms

C19orf61, F17127_1, FLJ12886

Location
About this transcript

This transcript has 13 exons, is annotated with 8 domains and features, is associated with 10721 variant alleles and maps to 414 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000601170.1SMG9-0022387495aaENSP00000471398.1
 
Protein coding
M0QX70 M0QYR7 M0QZC7
M0QZH1 M0R2N0 Q9H0W8
-GENCODE basic
ENST00000270066.6SMG9-0012353520aaENSP00000270066.6
 
Protein coding
CCDS33043M0QX70 M0QYR7 M0QZC7
M0QZH1 M0R2N0 Q9H0W8
NM_019108.2GENCODE basic
ENST00000597586.1SMG9-008697156aaENSP00000472684.1
 
Protein coding
M0QX70 M0QYR7 M0QZH1
M0R2N0
-CDS 3' incomplete
ENST00000602222.1SMG9-005650183aaENSP00000470451.1
 
Protein coding
M0QX70 M0QYR7 M0QZC7
M0QZH1 M0R2N0
-CDS 3' incomplete
ENST00000596714.1SMG9-007576115aaENSP00000470541.1
 
Protein coding
M0QZH1 -CDS 3' incomplete
ENST00000601925.1SMG9-006550148aaENSP00000470031.1
 
Protein coding
M0QX70 M0QYR7 M0QZH1
-CDS 3' incomplete
ENST00000599804.1SMG9-009438120aaENSP00000468941.1
 
Protein coding
M0QX70 M0QZH1 -CDS 3' incomplete
ENST00000597598.1SMG9-0041077157aaENSP00000471442.1
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000595700.1SMG9-0031401No protein-
 
Retained intron
---
ENST00000598886.1SMG9-010681No protein-
 
Retained intron
---
ENST00000598860.1SMG9-011574No protein-
 
Retained intron
---
ENST00000594081.1SMG9-012563No protein-
 
Retained intron
---
ENST00000600097.1SMG9-013538No protein-
 
Retained intron
---
Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,387 bps, Translation length: 495 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H0W8

Version

ENST00000601170.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000463586 (version 1)
Annotation Attributes

retained intron final [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.