Description
SMG9 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:25763]
Gene Synonyms
C19orf61, F17127_1, FLJ12886
Location
Chromosome 19: 44,235,301-44,259,142 reverse strand.
About this transcript
This transcript has 14 exons, is annotated with 8 domains and features, is associated with 11253 variant alleles and maps to 530 oligo probes.
Gene
This transcript is a product of gene ENSG00000105771.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000601170.1 | SMG9-002 | 2387 | 495aa | ENSP00000471398.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QX70 M0QYR7 M0QZC7 M0QZH1 M0R2N0 Q9H0W8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000270066.6 | SMG9-001 | 2353 | 520aa | ENSP00000270066.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33043 | M0QX70 M0QYR7 M0QZC7 M0QZH1 M0R2N0 Q9H0W8 | NM_019108.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000597586.1 | SMG9-008 | 697 | 156aa | ENSP00000472684.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QX70 M0QYR7 M0QZH1 M0R2N0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000602222.1 | SMG9-005 | 650 | 183aa | ENSP00000470451.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QX70 M0QYR7 M0QZC7 M0QZH1 M0R2N0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000596714.1 | SMG9-007 | 576 | 115aa | ENSP00000470541.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QZH1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000601925.1 | SMG9-006 | 550 | 148aa | ENSP00000470031.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QX70 M0QYR7 M0QZH1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000599804.1 | SMG9-009 | 438 | 120aa | ENSP00000468941.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QX70 M0QZH1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000597598.1 | SMG9-004 | 1077 | 157aa | ENSP00000471442.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000595700.1 | SMG9-003 | 1401 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000598886.1 | SMG9-010 | 681 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000598860.1 | SMG9-011 | 574 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000594081.1 | SMG9-012 | 563 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000600097.1 | SMG9-013 | 538 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |