Transcript: ENST00000602210.1 GRIK5-006

Description

glutamate receptor, ionotropic, kainate 5 [Source:HGNC Symbol;Acc:4583]

Gene Synonyms

EAA2, GRIK2, GluK5, KA2

Location

About this transcript

This transcript has 3 exons, is associated with 2008 variant alleles and maps to 312 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262895.3	GRIK5-002	3493	980aa	ENSP00000262895.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12595	Q16478	NM_002088.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000301218.4	GRIK5-001	3310	981aa	ENSP00000301218.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16478	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593562.1	GRIK5-004	3308	980aa	ENSP00000470251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12595	Q16478	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594528.1	GRIK5-005	2101	110aa	ENSP00000469135.1	Nonsense mediated decay		M0QXF6	-	-
ENST00000454993.2	GRIK5-003	2370	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602210.1	GRIK5-006	389	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 389 bps,

Version

ENST00000602210.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000463455 (version 1)