Transcript: ENST00000462990.1 PPP2R1A-003

Description

protein phosphatase 2, regulatory subunit A, alpha [Source:HGNC Symbol;Acc:9302]

Gene Synonyms

PP2A-Aalpha, PP2AAALPHA, PR65A

Location

Chromosome 19: 52,704,346-52,729,670 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 16 domains and features, is associated with 12861 variant alleles and maps to 737 oligo probes.

Gene

This transcript is a product of gene ENSG00000105568.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322088.6	PPP2R1A-001	3281	589aa	ENSP00000324804.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12849	A8K7B7 B3KQV6 B4DDF7 P30153	NM_014225.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462990.1	PPP2R1A-003	2730	410aa	ENSP00000470504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KQV6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444322.2	PPP2R1A-201	1944	534aa	ENSP00000415067.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KQV6 F5H3X9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454220.2	PPP2R1A-004	1233	395aa	ENSP00000391905.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9C1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000391791.4	PPP2R1A-012	979	132aa	ENSP00000375668.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000477989.1	PPP2R1A-005	444	66aa	ENSP00000471298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0K6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490868.1	PPP2R1A-006	668	38aa	ENSP00000469150.1	Nonsense mediated decay		M0QXG4	-	-
ENST00000473455.2	PPP2R1A-008	615	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495876.1	PPP2R1A-007	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468280.1	PPP2R1A-009	688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473820.1	PPP2R1A-011	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462047.1	PPP2R1A-010	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 11, Transcript length: 2,730 bps, Translation length: 410 residues

Version

ENST00000462990.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000267969 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000462990.1 PPP2R1A-003

Summary