Transcript: ENST00000262646.7 RAB2A-001

Description

RAB2A, member RAS oncogene family [Source:HGNC Symbol;Acc:9763]

Gene Synonyms

LHX, RAB2

Location

Chromosome 8: 61,429,416-61,536,186 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 48653 variant alleles and maps to 767 oligo probes.

Gene

This transcript is a product of gene ENSG00000104388.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262646.7	RAB2A-001	3848	212aa	ENSP00000262646.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6175	P61019	NM_002865.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531289.1	RAB2A-007	1058	188aa	ENSP00000431846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56537	P61019	NM_001242644.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452437.1	RAB2A-002	737	104aa	ENSP00000398054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000529579.1	RAB2A-011	680	181aa	ENSP00000431589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKL7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531098.1	RAB2A-008	566	10aa	ENSP00000432735.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000466595.1	RAB2A-006	866	135aa	ENSP00000432855.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000534260.1	RAB2A-009	410	69aa	ENSP00000433875.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530071.1	RAB2A-012	659	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000396696.1	RAB2A-003	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000429861.1	RAB2A-004	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481569.1	RAB2A-005	506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525529.1	RAB2A-010	453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,848 bps, Translation length: 212 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P61019

CCDS

This transcript is a member of the Human CCDS set: CCDS6175

Version

ENST00000262646.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000259145 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000262646.7 RAB2A-001

Summary