Transcript: ENST00000560319.1 IGDCC4-006

Description

immunoglobulin superfamily, DCC subclass, member 4 [Source:HGNC Symbol;Acc:13770]

Gene Synonyms

DDM36, KIAA1628, LOC57722, NOPE

Location

About this transcript

This transcript has 2 exons, is associated with 577 variant alleles and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000352385.2	IGDCC4-001	6508	1250aa	ENSP00000319623.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10206	Q8TDY8	NM_020962.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558048.1	IGDCC4-003	3407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559327.1	IGDCC4-002	5544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558819.1	IGDCC4-005	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560319.1	IGDCC4-006	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561309.1	IGDCC4-004	469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 539 bps,

Version

ENST00000560319.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000418483 (version 1)