Transcript: ENST00000564790.1 GSPT1-009

Description

G1 to S phase transition 1 [Source:HGNC Symbol;Acc:4621]

Gene Synonyms

551G9.2, ERF3A, ETF3A, GST1, eRF3a

Location

Chromosome 16: 11,974,082-11,980,761 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 3272 variant alleles and maps to 87 oligo probes.

Gene

This transcript is a product of gene ENSG00000103342.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434724.2	GSPT1-001	7105	637aa	ENSP00000398131.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45412	P15170	NM_002094.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439887.2	GSPT1-002	2509	636aa	ENSP00000408399.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45413	P15170 Q7KZX8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563468.1	GSPT1-005	1962	499aa	ENSP00000454351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45414	P15170	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565267.1	GSPT1-004	1864	475aa	ENSP00000456057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000420576.2	GSPT1-003	1603	499aa	ENSP00000399539.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45414	P15170	NM_001130007.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568849.1	GSPT1-006	790	199aa	ENSP00000456897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562169.1	GSPT1-007	466	94aa	ENSP00000454538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMT9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564790.1	GSPT1-009	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567631.1	GSPT1-008	678	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562794.1	GSPT1-010	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 491 bps,

Version

ENST00000564790.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421515 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000564790.1 GSPT1-009

Summary