Transcript: ENST00000439887.2 GSPT1-002

Description

G1 to S phase transition 1 [Source:HGNC Symbol;Acc:4621]

Gene Synonyms

551G9.2, ERF3A, ETF3A, GST1, eRF3a

Location

Chromosome 16: 11,966,536-12,009,735 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 24 domains and features, is associated with 23757 variant alleles and maps to 611 oligo probes.

Gene

This transcript is a product of gene ENSG00000103342.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434724.2	GSPT1-001	7105	637aa	ENSP00000398131.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45412	P15170	NM_002094.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439887.2	GSPT1-002	2509	636aa	ENSP00000408399.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45413	P15170 Q7KZX8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563468.1	GSPT1-005	1962	499aa	ENSP00000454351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45414	P15170	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565267.1	GSPT1-004	1864	475aa	ENSP00000456057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000420576.2	GSPT1-003	1603	499aa	ENSP00000399539.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45414	P15170	NM_001130007.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568849.1	GSPT1-006	790	199aa	ENSP00000456897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562169.1	GSPT1-007	466	94aa	ENSP00000454538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMT9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564790.1	GSPT1-009	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567631.1	GSPT1-008	678	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562794.1	GSPT1-010	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,509 bps, Translation length: 636 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P15170

CCDS

This transcript is a member of the Human CCDS set: CCDS45413

Version

ENST00000439887.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000421511 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000439887.2 GSPT1-002

Summary