Transcript: ENST00000219611.2 CAPN15-001

Description

calpain 15 [Source:HGNC Symbol;Acc:11182]

Gene Synonyms

SOLH

Location

Chromosome 16: 577,856-604,636 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 40 domains and features, is associated with 18767 variant alleles and maps to 545 oligo probes.

Gene

This transcript is a product of gene ENSG00000103326.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000219611.2	CAPN15-001	4744	1086aa	ENSP00000219611.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10410	H3BR03 O75808	NM_005632.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562370.1	CAPN15-005	942	184aa	ENSP00000456017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BR03	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568988.1	CAPN15-006	911	112aa	ENSP00000457030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BT55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566977.1	CAPN15-008	279	71aa	ENSP00000457306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567216.1	CAPN15-003	3174	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568402.1	CAPN15-007	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000565010.1	CAPN15-004	1952	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 11, Transcript length: 4,744 bps, Translation length: 1,086 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75808

CCDS

This transcript is a member of the Human CCDS set: CCDS10410

Version

ENST00000219611.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000239271 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000219611.2 CAPN15-001

Summary