Transcript: ENST00000251127.6 NALCN-001

Description

sodium leak channel, non-selective [Source:HGNC Symbol;Acc:19082]

Gene Synonyms

CanIon, INNFD, VGCNL1, bA430M15.1

Location

About this transcript

This transcript has 44 exons, is annotated with 46 domains and features, is associated with 157616 variant alleles and maps to 1165 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251127.6	NALCN-001	6816	1738aa	ENSP00000251127.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9498	B3KMK1 B3KX53 Q8IZF0	NM_052867.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376196.3	NALCN-201	2864	668aa	ENSP00000365367.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z323	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376200.5	NALCN-202	1126	218aa	ENSP00000365373.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IZF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470333.1	NALCN-003	2825	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467264.1	NALCN-004	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497170.1	NALCN-002	2609	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 44, Coding exons: 43, Transcript length: 6,816 bps, Translation length: 1,738 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IZF0

CCDS

This transcript is a member of the Human CCDS set: CCDS9498

Version

ENST00000251127.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000045663 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.