Transcript: ENST00000488089.1 LAMA1-004

Description

laminin, alpha 1 [Source:HGNC Symbol;Acc:6481]

Gene Synonyms

LAMA, S-LAM-alpha

Location

Chromosome 18: 6,953,729-6,960,694 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3285 variant alleles and maps to 208 oligo probes.

Gene

This transcript is a product of gene ENSG00000101680.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389658.3	LAMA1-001	9657	3075aa	ENSP00000374309.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32787	P25391 Q6P6D3 Q7Z5W6	NM_005559.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579014.1	LAMA1-007	10374	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488089.1	LAMA1-004	4577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488064.1	LAMA1-002	2825	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492048.1	LAMA1-003	2306	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490190.1	LAMA1-006	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585178.1	LAMA1-008	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484335.1	LAMA1-005	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 4,577 bps,

Version

ENST00000488089.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000257372 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000488089.1 LAMA1-004

Summary