Transcript: ENST00000389658.3 LAMA1-001

Description

laminin, alpha 1 [Source:HGNC Symbol;Acc:6481]

Gene Synonyms

LAMA, S-LAM-alpha

Location

Chromosome 18: 6,941,743-7,117,813 reverse strand.

About this transcript

This transcript has 63 exons, is annotated with 157 domains and features, is associated with 82541 variant alleles and maps to 2236 oligo probes.

Gene

This transcript is a product of gene ENSG00000101680.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389658.3	LAMA1-001	9657	3075aa	ENSP00000374309.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32787	P25391 Q6P6D3 Q7Z5W6	NM_005559.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579014.1	LAMA1-007	10374	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488089.1	LAMA1-004	4577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488064.1	LAMA1-002	2825	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492048.1	LAMA1-003	2306	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490190.1	LAMA1-006	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585178.1	LAMA1-008	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484335.1	LAMA1-005	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 63, Coding exons: 63, Transcript length: 9,657 bps, Translation length: 3,075 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25391

CCDS

This transcript is a member of the Human CCDS set: CCDS32787

Version

ENST00000389658.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257369 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000389658.3 LAMA1-001

Summary