Transcript: ENST00000492135.1 NOP56-011

Description

NOP56 ribonucleoprotein [Source:HGNC Symbol;Acc:15911]

Gene Synonyms

HBII-55, MIRN1292, NOL5A, RNU57, SCA36, U57, U86, hsa-mir-1292

Location

Chromosome 20: 2,636,592-2,639,039 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1598 variant alleles and maps to 442 oligo probes.

Gene

This transcript is a product of gene ENSG00000101361.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329276.5	NOP56-009	2400	594aa	ENSP00000370589.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13030	O00567 Q9BSN3	NM_006392.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000415272.1	NOP56-010	919	219aa	ENSP00000403199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000445139.1	NOP56-016	856	281aa	ENSP00000388497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JXT2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467196.1	NOP56-007	1320	252aa	ENSP00000434317.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000492135.1	NOP56-011	1143	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466447.1	NOP56-006	1094	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484998.1	NOP56-017	998	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469588.1	NOP56-002	950	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480992.1	NOP56-003	929	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494697.1	NOP56-012	919	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462630.1	NOP56-005	859	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460258.1	NOP56-015	837	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467857.1	NOP56-008	735	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496775.1	NOP56-013	729	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470143.1	NOP56-014	663	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480447.1	NOP56-004	651	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490753.1	NOP56-001	640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471023.1	NOP56-018	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,143 bps,

Version

ENST00000492135.1

Type

Processed transcript

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000077633 (version 2)

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Recent locations

Transcript: ENST00000492135.1 NOP56-011

Summary