Transcript: ENST00000217254.7 SLC52A3-001

Description

solute carrier family 52 (riboflavin transporter), member 3 [Source:HGNC Symbol;Acc:16187]

Gene Synonyms

BVVLS, BVVLS1, C20orf54, RFT2, RFVT3, bA371L19.1, hRFT2

Location

About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 4222 variant alleles and maps to 339 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381944.3	SLC52A3-004	3060	415aa	ENSP00000371370.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NQ40	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000217254.7	SLC52A3-001	2598	469aa	ENSP00000217254.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13007	K0A6P4 Q9NQ40	NM_033409.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473664.1	SLC52A3-002	957	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488495.1	SLC52A3-003	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,598 bps, Translation length: 469 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQ40

CCDS

This transcript is a member of the Human CCDS set: CCDS13007

Version

ENST00000217254.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000077482 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.