Transcript: ENST00000460062.2 CSNK2A1-007

Description

casein kinase 2, alpha 1 polypeptide [Source:HGNC Symbol;Acc:2457]

Gene Synonyms

CK2A1, CKII, CSNK2A3

Location

Chromosome 20: 476,384-524,373 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 21927 variant alleles and maps to 196 oligo probes.

Gene

This transcript is a product of gene ENSG00000101266.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000217244.3	CSNK2A1-002	4416	391aa	ENSP00000217244.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13003	P68400	NM_177559.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349736.5	CSNK2A1-001	4299	391aa	ENSP00000339247.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13003	P68400	NM_001895.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400227.3	CSNK2A1-201	1483	385aa	ENSP00000383086.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EU96	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400217.2	CSNK2A1-003	1451	255aa	ENSP00000383076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13004	P68400	NM_177560.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609525.1	CSNK2A1-006	581	74aa	ENSP00000476547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000608066.1	CSNK2A1-005	577	79aa	ENSP00000476486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000460062.2	CSNK2A1-007	552	27aa	ENSP00000477147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000609606.1	CSNK2A1-008	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000608490.1	CSNK2A1-004	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 552 bps, Translation length: 27 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000460062.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000472076 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000460062.2 CSNK2A1-007

Summary