Transcript: ENST00000497209.1 SLCO4A1-005

Description

solute carrier organic anion transporter family, member 4A1 [Source:HGNC Symbol;Acc:10953]

Gene Synonyms

OATP-E, OATP1, OATP4A1, OATPE, OATPRP1, POAT, SLC21A12

Location

Chromosome 20: 61,273,872-61,303,645 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 16380 variant alleles and maps to 698 oligo probes.

Gene

This transcript is a product of gene ENSG00000101187.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000217159.1	SLCO4A1-201	2776	722aa	ENSP00000217159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13501	Q96BD0	NM_016354.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370507.1	SLCO4A1-006	2665	722aa	ENSP00000359538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13501	Q96BD0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451793.1	SLCO4A1-007	856	151aa	ENSP00000414855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000497209.1	SLCO4A1-005	3092	620aa	ENSP00000434245.1	Nonsense mediated decay		E1P5H9	-	-
ENST00000470412.1	SLCO4A1-004	986	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466961.1	SLCO4A1-003	819	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466818.1	SLCO4A1-008	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495889.1	SLCO4A1-001	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497919.1	SLCO4A1-002	440	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 7, Transcript length: 3,092 bps, Translation length: 620 residues

Version

ENST00000497209.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000080047 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000497209.1 SLCO4A1-005

Summary