Transcript: ENST00000216832.4 PNN-001

Description

pinin, desmosome associated protein [Source:HGNC Symbol;Acc:9162]

Gene Synonyms

DRS, DRSP, MEMA, SDK3, memA

Location

About this transcript

This transcript has 9 exons, is annotated with 18 domains and features, is associated with 4745 variant alleles and maps to 708 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216832.4	PNN-001	3576	717aa	ENSP00000216832.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9671	Q9H307	NM_002687.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553331.1	PNN-004	656	124aa	ENSP00000452217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V579	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556530.1	PNN-003	601	117aa	ENSP00000452318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5F0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557680.1	PNN-005	912	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554117.1	PNN-002	624	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554902.1	PNN-006	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,576 bps, Translation length: 717 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H307

CCDS

This transcript is a member of the Human CCDS set: CCDS9671

Version

ENST00000216832.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000276776 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.