Transcript: ENST00000216807.7 BRMS1L-001

Description

breast cancer metastasis-suppressor 1-like [Source:HGNC Symbol;Acc:20512]

Gene Synonyms

BRMS1, FLJ39177, MGC11296

Location

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 18566 variant alleles and maps to 517 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216807.7	BRMS1L-001	2657	323aa	ENSP00000216807.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32066	B2RD65 B3KU43 Q5PSV4	NM_032352.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543183.1	BRMS1L-201	1544	275aa	ENSP00000443781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2RD65 B3KU43	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551774.1	BRMS1L-006	1201	215aa	ENSP00000446826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000552677.1	BRMS1L-002	1544	48aa	ENSP00000448615.1	Nonsense mediated decay		F8VRR2	-	-
ENST00000547420.1	BRMS1L-004	650	48aa	ENSP00000447022.1	Nonsense mediated decay		F8VRR2	-	-
ENST00000548758.1	BRMS1L-003	1077	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552849.1	BRMS1L-005	290	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,657 bps, Translation length: 323 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5PSV4

CCDS

This transcript is a member of the Human CCDS set: CCDS32066

Version

ENST00000216807.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000409601 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.