Transcript: ENST00000553835.1 PSMC1-004

Description

proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Source:HGNC Symbol;Acc:9547]

Gene Synonyms

P26S4, S4, p56

Location

Chromosome 14: 90,722,871-90,734,618 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 5048 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSG00000100764.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261303.8	PSMC1-001	1641	440aa	ENSP00000261303.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32139	B4DR63 G3V4X1 P62191 Q53XL8	NM_002802.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543772.2	PSMC1-002	1389	367aa	ENSP00000445147.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DR63 G3V4X1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553835.1	PSMC1-004	390	84aa	ENSP00000452049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4X1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555787.1	PSMC1-003	2246	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555679.1	PSMC1-006	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557357.1	PSMC1-007	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554624.1	PSMC1-005	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 390 bps, Translation length: 84 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000553835.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411254 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000553835.1 PSMC1-004

Summary