Transcript: ENST00000261303.8 PSMC1-001

Description

proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Source:HGNC Symbol;Acc:9547]

Gene Synonyms

P26S4, S4, p56

Location

Chromosome 14: 90,722,839-90,738,966 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 6887 variant alleles and maps to 705 oligo probes.

Gene

This transcript is a product of gene ENSG00000100764.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261303.8	PSMC1-001	1641	440aa	ENSP00000261303.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32139	B4DR63 G3V4X1 P62191 Q53XL8	NM_002802.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543772.2	PSMC1-002	1389	367aa	ENSP00000445147.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DR63 G3V4X1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553835.1	PSMC1-004	390	84aa	ENSP00000452049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4X1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555787.1	PSMC1-003	2246	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555679.1	PSMC1-006	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557357.1	PSMC1-007	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554624.1	PSMC1-005	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,641 bps, Translation length: 440 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62191

CCDS

This transcript is a member of the Human CCDS set: CCDS32139

Version

ENST00000261303.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000411253 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261303.8 PSMC1-001

Summary