Transcript: ENST00000553999.1 HIF1A-005

Description

hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) [Source:HGNC Symbol;Acc:4910]

Gene Synonyms

BHLHE78, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1, PASD8, bHLHe78

Location

Chromosome 14: 62,162,231-62,193,481 forward strand.

About this transcript

This transcript has 4 exons, is associated with 13163 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000100644.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394997.1	HIF1A-003	3922	827aa	ENSP00000378446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MYV6 B4E2U7 F8W9L0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337138.4	HIF1A-001	3919	826aa	ENSP00000338018.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9753	B4E2U7 D0VY79 F8W9L0 Q16665	NM_001530.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000323441.6	HIF1A-002	3555	735aa	ENSP00000323326.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9754	Q16665	NM_181054.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557538.1	HIF1A-004	3468	767aa	ENSP00000451696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2U7 F8W9L0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539097.1	HIF1A-201	3468	850aa	ENSP00000437955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58324	B4E2U7 F8W9L0 Q16665	NM_001243084.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557206.1	HIF1A-012	767	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555014.1	HIF1A-011	739	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553999.1	HIF1A-005	616	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556237.1	HIF1A-007	595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557446.1	HIF1A-008	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556827.1	HIF1A-009	752	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547430.2	HIF1A-010	711	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 616 bps,

Version

ENST00000553999.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411757 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000553999.1 HIF1A-005

Summary