Transcript: ENST00000555761.1 SNW1-003

Description

SNW domain containing 1 [Source:HGNC Symbol;Acc:16696]

Gene Synonyms

Bx42, NCOA-62, NCoA-62, PRPF45, Prp45, SKIIP, SKIP

Location

Chromosome 14: 78,184,296-78,227,499 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 5 domains and features, is associated with 19172 variant alleles and maps to 465 oligo probes.

Gene

This transcript is a product of gene ENSG00000100603.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261531.7	SNW1-001	2163	536aa	ENSP00000261531.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9867	G3V4X8 Q13573	NM_012245.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555761.1	SNW1-003	1855	571aa	ENSP00000451129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3A4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554775.1	SNW1-004	1687	374aa	ENSP00000452059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4X8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554324.1	SNW1-007	584	185aa	ENSP00000452473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5R3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556428.1	SNW1-002	1966	47aa	ENSP00000451741.1	Nonsense mediated decay		G3V4E0	-	-
ENST00000557663.1	SNW1-006	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553565.1	SNW1-008	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,855 bps, Translation length: 571 residues

Version

ENST00000555761.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000413916 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000555761.1 SNW1-003

Summary